Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYN1P17600 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.96■□□□□ 0.95
SYN1P17600 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SYN1P17600 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.96■□□□□ 0.95
SYN1P17600 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.96■□□□□ 0.95
SYN1P17600 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.96■□□□□ 0.95
SYN1P17600 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.96■□□□□ 0.95
SYN1P17600 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.96■□□□□ 0.95
SYN1P17600 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.96■□□□□ 0.95
SYN1P17600 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.96■□□□□ 0.95
SYN1P17600 AL353801.3-201ENST00000609898 542 ntBASIC20.96■□□□□ 0.95
SYN1P17600 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.96■□□□□ 0.95
SYN1P17600 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYN1P17600 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.96■□□□□ 0.95
SYN1P17600 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYN1P17600 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.96■□□□□ 0.95
SYN1P17600 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.96■□□□□ 0.95
SYN1P17600 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SYN1P17600 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
SYN1P17600 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.95■□□□□ 0.94
SYN1P17600 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.95■□□□□ 0.94
SYN1P17600 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.95■□□□□ 0.94
SYN1P17600 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYN1P17600 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYN1P17600 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYN1P17600 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYN1P17600 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYN1P17600 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYN1P17600 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SYN1P17600 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SYN1P17600 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.94■□□□□ 0.94
SYN1P17600 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.94■□□□□ 0.94
SYN1P17600 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.94■□□□□ 0.94
SYN1P17600 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 FAM220CP-201ENST00000395253 831 ntBASIC20.94■□□□□ 0.94
SYN1P17600 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 AC104819.1-201ENST00000504587 486 ntBASIC20.94■□□□□ 0.94
SYN1P17600 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.94■□□□□ 0.94
SYN1P17600 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.94■□□□□ 0.94
SYN1P17600 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.94■□□□□ 0.94
SYN1P17600 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.94■□□□□ 0.94
SYN1P17600 FBXW4P1-201ENST00000426721 2239 ntBASIC20.94■□□□□ 0.94
SYN1P17600 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.94■□□□□ 0.94
SYN1P17600 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SYN1P17600 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYN1P17600 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SYN1P17600 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.93■□□□□ 0.94
SYN1P17600 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.93■□□□□ 0.94
SYN1P17600 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 RNF126P1-202ENST00000569893 925 ntBASIC20.93■□□□□ 0.94
SYN1P17600 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SYN1P17600 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.93■□□□□ 0.94
SYN1P17600 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.93■□□□□ 0.94
SYN1P17600 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SYN1P17600 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYN1P17600 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN1P17600 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SYN1P17600 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SYN1P17600 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.92■□□□□ 0.94
SYN1P17600 POLD2P1-201ENST00000511220 997 ntBASIC20.92■□□□□ 0.94
SYN1P17600 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.92■□□□□ 0.94
SYN1P17600 AC074051.2-201ENST00000565115 352 ntBASIC20.92■□□□□ 0.94
SYN1P17600 LINC02084-201ENST00000606069 1096 ntBASIC20.92■□□□□ 0.94
SYN1P17600 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN1P17600 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SYN1P17600 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN1P17600 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SYN1P17600 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN1P17600 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms