Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.77■□□□□ 0.44
PRKCAP17252 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 NBPF21P-201ENST00000425093 1451 ntBASIC17.77■□□□□ 0.44
PRKCAP17252 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 KRT18P29-201ENST00000397031 1267 ntBASIC17.77■□□□□ 0.44
PRKCAP17252 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.77■□□□□ 0.44
PRKCAP17252 AC239809.2-201ENST00000415381 517 ntBASIC17.77■□□□□ 0.44
PRKCAP17252 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRKCAP17252 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.77■□□□□ 0.44
PRKCAP17252 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PRKCAP17252 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRKCAP17252 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRKCAP17252 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.77■□□□□ 0.43
PRKCAP17252 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRKCAP17252 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PRKCAP17252 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.76■□□□□ 0.43
PRKCAP17252 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 AC007613.1-201ENST00000572811 2597 ntBASIC17.76■□□□□ 0.43
PRKCAP17252 AC116562.4-201ENST00000641316 2276 ntBASIC17.76■□□□□ 0.43
PRKCAP17252 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 ABHD17AP1-201ENST00000358206 933 ntBASIC17.76■□□□□ 0.43
PRKCAP17252 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PRKCAP17252 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.76■□□□□ 0.43
PRKCAP17252 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.76■□□□□ 0.43
PRKCAP17252 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.76■□□□□ 0.43
PRKCAP17252 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PRKCAP17252 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.76■□□□□ 0.43
PRKCAP17252 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PRKCAP17252 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PRKCAP17252 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PRKCAP17252 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
PRKCAP17252 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.76■□□□□ 0.43
PRKCAP17252 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRKCAP17252 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.75■□□□□ 0.43
PRKCAP17252 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.75■□□□□ 0.43
PRKCAP17252 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
PRKCAP17252 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 KRASP1-201ENST00000407852 552 ntBASIC17.75■□□□□ 0.43
PRKCAP17252 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 KRT18P16-201ENST00000510337 1294 ntBASIC17.75■□□□□ 0.43
PRKCAP17252 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.75■□□□□ 0.43
PRKCAP17252 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PRKCAP17252 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.75■□□□□ 0.43
PRKCAP17252 AC124016.1-201ENST00000609552 612 ntBASIC17.75■□□□□ 0.43
PRKCAP17252 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PRKCAP17252 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PRKCAP17252 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRKCAP17252 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms