Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLUP10909 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLUP10909 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLUP10909 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLUP10909 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLUP10909 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLUP10909 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLUP10909 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLUP10909 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLUP10909 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLUP10909 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLUP10909 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.33■□□□□ 0.36
CLUP10909 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.33■□□□□ 0.36
CLUP10909 MIPEPP3-201ENST00000412105 444 ntBASIC17.33■□□□□ 0.36
CLUP10909 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.33■□□□□ 0.36
CLUP10909 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.33■□□□□ 0.36
CLUP10909 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 SDHAP1-207ENST00000440850 2000 ntBASIC17.33■□□□□ 0.36
CLUP10909 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.33■□□□□ 0.36
CLUP10909 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CLUP10909 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
CLUP10909 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLUP10909 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLUP10909 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLUP10909 AC020763.4-201ENST00000623414 4170 ntBASIC17.32■□□□□ 0.36
CLUP10909 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.32■□□□□ 0.36
CLUP10909 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
CLUP10909 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLUP10909 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.32■□□□□ 0.36
CLUP10909 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 AC007613.1-201ENST00000572811 2597 ntBASIC17.32■□□□□ 0.36
CLUP10909 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.32■□□□□ 0.36
CLUP10909 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.32■□□□□ 0.36
CLUP10909 AC073210.2-201ENST00000430369 194 ntBASIC17.32■□□□□ 0.36
CLUP10909 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.32■□□□□ 0.36
CLUP10909 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLUP10909 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLUP10909 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.32■□□□□ 0.36
CLUP10909 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.32■□□□□ 0.36
CLUP10909 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLUP10909 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
CLUP10909 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.31■□□□□ 0.36
CLUP10909 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLUP10909 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLUP10909 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.31■□□□□ 0.36
CLUP10909 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.31■□□□□ 0.36
CLUP10909 AL137784.2-201ENST00000607332 1000 ntBASIC17.31■□□□□ 0.36
CLUP10909 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.31■□□□□ 0.36
CLUP10909 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.31■□□□□ 0.36
CLUP10909 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.31■□□□□ 0.36
CLUP10909 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLUP10909 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLUP10909 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLUP10909 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLUP10909 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CLUP10909 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.3■□□□□ 0.36
CLUP10909 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLUP10909 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.3■□□□□ 0.36
CLUP10909 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLUP10909 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLUP10909 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.3■□□□□ 0.36
CLUP10909 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.3■□□□□ 0.36
CLUP10909 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLUP10909 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLUP10909 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms