Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.46■□□□□ 0.23
VSIG8P0DPA2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 MKRN4P-201ENST00000444706 1521 ntBASIC16.46■□□□□ 0.23
VSIG8P0DPA2 AL512353.2-201ENST00000448759 1962 ntBASIC16.46■□□□□ 0.23
VSIG8P0DPA2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 AC124283.5-201ENST00000624661 1809 ntBASIC16.46■□□□□ 0.23
VSIG8P0DPA2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 AC079598.2-202ENST00000546624 1451 ntBASIC16.46■□□□□ 0.23
VSIG8P0DPA2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
VSIG8P0DPA2 AL390961.4-201ENST00000623958 2535 ntBASIC16.46■□□□□ 0.22
VSIG8P0DPA2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.46■□□□□ 0.22
VSIG8P0DPA2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VSIG8P0DPA2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VSIG8P0DPA2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 BX276092.2-201ENST00000417668 665 ntBASIC16.45■□□□□ 0.22
VSIG8P0DPA2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSIG8P0DPA2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.44■□□□□ 0.22
VSIG8P0DPA2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 AC105036.2-201ENST00000569468 176 ntBASIC16.44■□□□□ 0.22
VSIG8P0DPA2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.44■□□□□ 0.22
VSIG8P0DPA2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms