Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.43■□□□□ 0.7
SRPRAP08240 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.43■□□□□ 0.7
SRPRAP08240 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
SRPRAP08240 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.43■□□□□ 0.7
SRPRAP08240 AL049597.2-201ENST00000565575 961 ntBASIC19.43■□□□□ 0.7
SRPRAP08240 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SRPRAP08240 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRPRAP08240 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.43■□□□□ 0.7
SRPRAP08240 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
SRPRAP08240 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.42■□□□□ 0.7
SRPRAP08240 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.42■□□□□ 0.7
SRPRAP08240 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.42■□□□□ 0.7
SRPRAP08240 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.42■□□□□ 0.7
SRPRAP08240 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.42■□□□□ 0.7
SRPRAP08240 AL512604.3-201ENST00000569583 964 ntBASIC19.42■□□□□ 0.7
SRPRAP08240 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRPRAP08240 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SRPRAP08240 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SRPRAP08240 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
SRPRAP08240 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SRPRAP08240 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.41■□□□□ 0.7
SRPRAP08240 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.41■□□□□ 0.7
SRPRAP08240 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 SDHAP1-207ENST00000440850 2000 ntBASIC19.41■□□□□ 0.7
SRPRAP08240 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 BX664615.1-201ENST00000443558 458 ntBASIC19.41■□□□□ 0.7
SRPRAP08240 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SRPRAP08240 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.41■□□□□ 0.7
SRPRAP08240 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.41■□□□□ 0.7
SRPRAP08240 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRPRAP08240 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.4■□□□□ 0.7
SRPRAP08240 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 TREX1-205ENST00000625293 1783 ntBASIC19.4■□□□□ 0.7
SRPRAP08240 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.4■□□□□ 0.7
SRPRAP08240 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SRPRAP08240 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SRPRAP08240 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.4■□□□□ 0.7
SRPRAP08240 TSPY23P-201ENST00000440136 739 ntBASIC19.4■□□□□ 0.7
SRPRAP08240 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.4■□□□□ 0.7
SRPRAP08240 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
SRPRAP08240 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.4■□□□□ 0.7
SRPRAP08240 AL590326.2-201ENST00000625139 305 ntBASIC19.4■□□□□ 0.7
SRPRAP08240 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.4■□□□□ 0.7
SRPRAP08240 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SRPRAP08240 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.4■□□□□ 0.7
SRPRAP08240 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRPRAP08240 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRPRAP08240 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms