Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 AL031133.1-201ENST00000406807 723 ntBASIC19.13■□□□□ 0.65
CAPNS1P04632 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.13■□□□□ 0.65
CAPNS1P04632 AC022616.7-201ENST00000525383 220 ntBASIC19.13■□□□□ 0.65
CAPNS1P04632 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.13■□□□□ 0.65
CAPNS1P04632 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
CAPNS1P04632 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPNS1P04632 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPNS1P04632 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 AC116050.2-201ENST00000612102 1779 ntBASIC19.13■□□□□ 0.65
CAPNS1P04632 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CAPNS1P04632 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPNS1P04632 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPNS1P04632 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPNS1P04632 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPNS1P04632 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPNS1P04632 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CAPNS1P04632 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CAPNS1P04632 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPNS1P04632 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.12■□□□□ 0.65
CAPNS1P04632 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CAPNS1P04632 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPNS1P04632 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPNS1P04632 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.11■□□□□ 0.65
CAPNS1P04632 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPNS1P04632 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPNS1P04632 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.11■□□□□ 0.65
CAPNS1P04632 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPNS1P04632 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPNS1P04632 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.11■□□□□ 0.65
CAPNS1P04632 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.11■□□□□ 0.65
CAPNS1P04632 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CAPNS1P04632 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPNS1P04632 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPNS1P04632 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPNS1P04632 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPNS1P04632 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CAPNS1P04632 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPNS1P04632 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPNS1P04632 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CAPNS1P04632 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 FAM8A6P-201ENST00000407496 1135 ntBASIC19.1■□□□□ 0.65
CAPNS1P04632 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 AK4P3-201ENST00000418260 669 ntBASIC19.1■□□□□ 0.65
CAPNS1P04632 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPNS1P04632 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPNS1P04632 AC091390.4-202ENST00000476426 537 ntBASIC19.1■□□□□ 0.65
CAPNS1P04632 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.1■□□□□ 0.65
CAPNS1P04632 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.1■□□□□ 0.65
CAPNS1P04632 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPNS1P04632 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPNS1P04632 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.1■□□□□ 0.65
CAPNS1P04632 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPNS1P04632 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPNS1P04632 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 TMEM179-206ENST00000616017 1645 ntBASIC19.1■□□□□ 0.65
CAPNS1P04632 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPNS1P04632 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPNS1P04632 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPNS1P04632 TREX1-205ENST00000625293 1783 ntBASIC19.09■□□□□ 0.65
CAPNS1P04632 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CAPNS1P04632 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPNS1P04632 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms