Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRAP04437 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRAP04437 AL354751.1-201ENST00000412768 1863 ntBASIC14.64□□□□□ -0.07
TCRAP04437 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRAP04437 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRAP04437 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRAP04437 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRAP04437 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRAP04437 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRAP04437 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TCRAP04437 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 TFP1-202ENST00000475455 1573 ntBASIC14.64□□□□□ -0.07
TCRAP04437 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRAP04437 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRAP04437 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TCRAP04437 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.63□□□□□ -0.07
TCRAP04437 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TCRAP04437 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 AL355472.2-201ENST00000422958 438 ntBASIC14.63□□□□□ -0.07
TCRAP04437 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRAP04437 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.63□□□□□ -0.07
TCRAP04437 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.63□□□□□ -0.07
TCRAP04437 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 AC069236.1-201ENST00000604339 616 ntBASIC14.63□□□□□ -0.07
TCRAP04437 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRAP04437 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TCRAP04437 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRAP04437 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TCRAP04437 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRAP04437 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRAP04437 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TCRAP04437 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRAP04437 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TCRAP04437 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TCRAP04437 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRAP04437 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRAP04437 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRAP04437 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 AL133373.2-201ENST00000623187 2828 ntBASIC14.62□□□□□ -0.07
TCRAP04437 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRAP04437 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRAP04437 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRAP04437 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRAP04437 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRAP04437 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms