Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.12■□□□□ 0.33
APOA1P02647 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.12■□□□□ 0.33
APOA1P02647 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA1P02647 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA1P02647 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA1P02647 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOA1P02647 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA1P02647 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APOA1P02647 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA1P02647 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA1P02647 AC138907.5-202ENST00000569484 235 ntBASIC17.11■□□□□ 0.33
APOA1P02647 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA1P02647 AC067852.2-201ENST00000590513 2313 ntBASIC17.11■□□□□ 0.33
APOA1P02647 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA1P02647 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA1P02647 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOA1P02647 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA1P02647 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA1P02647 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA1P02647 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA1P02647 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APOA1P02647 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.1■□□□□ 0.33
APOA1P02647 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA1P02647 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.1■□□□□ 0.33
APOA1P02647 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.1■□□□□ 0.33
APOA1P02647 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA1P02647 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA1P02647 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA1P02647 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA1P02647 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.09■□□□□ 0.33
APOA1P02647 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.09■□□□□ 0.33
APOA1P02647 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA1P02647 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA1P02647 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms