Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 AC009053.2-201ENST00000563701 2365 ntBASIC14.46□□□□□ -0.1
HLA-DQA1P01909 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DQA1P01909 AL512353.2-201ENST00000448759 1962 ntBASIC14.45□□□□□ -0.1
HLA-DQA1P01909 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 AP001330.3-201ENST00000520123 633 ntBASIC14.45□□□□□ -0.1
HLA-DQA1P01909 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 FAM21FP-204ENST00000608637 956 ntBASIC14.45□□□□□ -0.1
HLA-DQA1P01909 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 AL355001.2-201ENST00000620617 1191 ntBASIC14.45□□□□□ -0.1
HLA-DQA1P01909 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQA1P01909 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 AC142381.2-201ENST00000566120 298 ntBASIC14.44□□□□□ -0.1
HLA-DQA1P01909 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA1P01909 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DQA1P01909 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms