Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 AC079598.2-202ENST00000546624 1451 ntBASIC19.68■□□□□ 0.74
TOP3BO95985 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP3BO95985 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 FAM197Y1-201ENST00000421178 764 ntBASIC19.68■□□□□ 0.74
TOP3BO95985 AC104076.2-201ENST00000448912 469 ntBASIC19.68■□□□□ 0.74
TOP3BO95985 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.68■□□□□ 0.74
TOP3BO95985 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.68■□□□□ 0.74
TOP3BO95985 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP3BO95985 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP3BO95985 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TOP3BO95985 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TOP3BO95985 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP3BO95985 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.68■□□□□ 0.74
TOP3BO95985 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TOP3BO95985 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.67■□□□□ 0.74
TOP3BO95985 TERF1P1-201ENST00000311003 1181 ntBASIC19.67■□□□□ 0.74
TOP3BO95985 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TOP3BO95985 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.67■□□□□ 0.74
TOP3BO95985 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 DUX4L26-201ENST00000489078 1255 ntBASIC19.67■□□□□ 0.74
TOP3BO95985 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TOP3BO95985 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TOP3BO95985 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TOP3BO95985 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP3BO95985 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TOP3BO95985 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TOP3BO95985 AL032819.2-201ENST00000624543 2162 ntBASIC19.66■□□□□ 0.74
TOP3BO95985 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TOP3BO95985 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.66■□□□□ 0.74
TOP3BO95985 TPM4P1-201ENST00000436100 807 ntBASIC19.66■□□□□ 0.74
TOP3BO95985 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.66■□□□□ 0.74
TOP3BO95985 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.66■□□□□ 0.74
TOP3BO95985 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TOP3BO95985 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.66■□□□□ 0.74
TOP3BO95985 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TOP3BO95985 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TOP3BO95985 AF186192.3-201ENST00000583427 947 ntBASIC19.66■□□□□ 0.74
TOP3BO95985 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.66■□□□□ 0.74
TOP3BO95985 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
TOP3BO95985 AP000525.1-201ENST00000608286 694 ntBASIC19.66■□□□□ 0.74
TOP3BO95985 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.66■□□□□ 0.74
TOP3BO95985 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TOP3BO95985 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
TOP3BO95985 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TOP3BO95985 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP3BO95985 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 AC093503.3-201ENST00000624917 2352 ntBASIC19.65■□□□□ 0.74
TOP3BO95985 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.65■□□□□ 0.74
TOP3BO95985 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 RBM17P1-201ENST00000453646 1190 ntBASIC19.65■□□□□ 0.74
TOP3BO95985 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 AL031963.3-201ENST00000606441 850 ntBASIC19.65■□□□□ 0.74
TOP3BO95985 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms