Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PDCD6O75340 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PDCD6O75340 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.24■□□□□ 0.19
PDCD6O75340 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.24■□□□□ 0.19
PDCD6O75340 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDCD6O75340 IRX1P1-201ENST00000438849 1838 ntBASIC16.24■□□□□ 0.19
PDCD6O75340 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDCD6O75340 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDCD6O75340 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDCD6O75340 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.23■□□□□ 0.19
PDCD6O75340 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDCD6O75340 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDCD6O75340 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.23■□□□□ 0.19
PDCD6O75340 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 GUSBP6-202ENST00000438529 1198 ntBASIC16.23■□□□□ 0.19
PDCD6O75340 KRT18P16-201ENST00000510337 1294 ntBASIC16.23■□□□□ 0.19
PDCD6O75340 PNMA6B-201ENST00000538162 1200 ntBASIC16.23■□□□□ 0.19
PDCD6O75340 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.23■□□□□ 0.19
PDCD6O75340 AC060766.5-201ENST00000590539 871 ntBASIC16.23■□□□□ 0.19
PDCD6O75340 MYC-209ENST00000641252 345 ntBASIC16.23■□□□□ 0.19
PDCD6O75340 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
PDCD6O75340 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PDCD6O75340 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDCD6O75340 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.22■□□□□ 0.19
PDCD6O75340 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PDCD6O75340 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.22■□□□□ 0.19
PDCD6O75340 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDCD6O75340 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDCD6O75340 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.22■□□□□ 0.19
PDCD6O75340 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.22■□□□□ 0.19
PDCD6O75340 TUBB8P6-201ENST00000436895 1288 ntBASIC16.22■□□□□ 0.19
PDCD6O75340 TSPY6P-201ENST00000448518 926 ntBASIC16.22■□□□□ 0.19
PDCD6O75340 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.22■□□□□ 0.19
PDCD6O75340 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
PDCD6O75340 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.22■□□□□ 0.19
PDCD6O75340 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.22■□□□□ 0.19
PDCD6O75340 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDCD6O75340 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDCD6O75340 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 AC093525.10-201ENST00000625130 1569 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 NEFHP1-201ENST00000412845 2629 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDCD6O75340 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.21■□□□□ 0.19
PDCD6O75340 NCF1B-203ENST00000435988 1254 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.21■□□□□ 0.19
PDCD6O75340 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
PDCD6O75340 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.21■□□□□ 0.19
PDCD6O75340 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.21■□□□□ 0.19
PDCD6O75340 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms