Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.84■□□□□ 0.77
TSPAN3O60637 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.84■□□□□ 0.77
TSPAN3O60637 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.84■□□□□ 0.77
TSPAN3O60637 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.84■□□□□ 0.77
TSPAN3O60637 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TSPAN3O60637 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
TSPAN3O60637 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TSPAN3O60637 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.83■□□□□ 0.77
TSPAN3O60637 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.83■□□□□ 0.77
TSPAN3O60637 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TSPAN3O60637 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TSPAN3O60637 AC010331.1-201ENST00000611423 582 ntBASIC19.83■□□□□ 0.77
TSPAN3O60637 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.83■□□□□ 0.76
TSPAN3O60637 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.83■□□□□ 0.76
TSPAN3O60637 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
TSPAN3O60637 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.83■□□□□ 0.76
TSPAN3O60637 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.83■□□□□ 0.76
TSPAN3O60637 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TSPAN3O60637 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TSPAN3O60637 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.83■□□□□ 0.76
TSPAN3O60637 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.83■□□□□ 0.76
TSPAN3O60637 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.82■□□□□ 0.76
TSPAN3O60637 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
TSPAN3O60637 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TSPAN3O60637 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 C2orf69P3-201ENST00000565542 1120 ntBASIC19.82■□□□□ 0.76
TSPAN3O60637 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TSPAN3O60637 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TSPAN3O60637 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TSPAN3O60637 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TSPAN3O60637 TREX1-205ENST00000625293 1783 ntBASIC19.82■□□□□ 0.76
TSPAN3O60637 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TSPAN3O60637 SDHAP1-207ENST00000440850 2000 ntBASIC19.81■□□□□ 0.76
TSPAN3O60637 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 INGX-201ENST00000359239 846 ntBASIC19.81■□□□□ 0.76
TSPAN3O60637 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.81■□□□□ 0.76
TSPAN3O60637 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.81■□□□□ 0.76
TSPAN3O60637 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.81■□□□□ 0.76
TSPAN3O60637 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.81■□□□□ 0.76
TSPAN3O60637 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.81■□□□□ 0.76
TSPAN3O60637 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TSPAN3O60637 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.81■□□□□ 0.76
TSPAN3O60637 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TSPAN3O60637 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
TSPAN3O60637 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.8■□□□□ 0.76
TSPAN3O60637 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 KRT18P22-201ENST00000402024 1347 ntBASIC19.8■□□□□ 0.76
TSPAN3O60637 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TSPAN3O60637 RCN1P1-201ENST00000400413 996 ntBASIC19.8■□□□□ 0.76
TSPAN3O60637 ECEL1P2-202ENST00000465689 757 ntBASIC19.8■□□□□ 0.76
TSPAN3O60637 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.8■□□□□ 0.76
TSPAN3O60637 AC005363.2-201ENST00000618631 242 ntBASIC19.8■□□□□ 0.76
TSPAN3O60637 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.8■□□□□ 0.76
TSPAN3O60637 AL158211.5-201ENST00000623583 2518 ntBASIC19.8■□□□□ 0.76
TSPAN3O60637 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TSPAN3O60637 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TSPAN3O60637 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms