Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.69■□□□□ 0.1
SSSCA1O60232 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.69■□□□□ 0.1
SSSCA1O60232 MFSD11-216ENST00000590393 1141 ntBASIC15.69■□□□□ 0.1
SSSCA1O60232 MYCNOS-205ENST00000641950 531 ntBASIC15.69■□□□□ 0.1
SSSCA1O60232 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 AC093525.10-201ENST00000625130 1569 ntBASIC15.69■□□□□ 0.1
SSSCA1O60232 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.69■□□□□ 0.1
SSSCA1O60232 BICD1-207ENST00000551848 1962 ntBASIC15.69■□□□□ 0.1
SSSCA1O60232 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.69■□□□□ 0.1
SSSCA1O60232 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.68■□□□□ 0.1
SSSCA1O60232 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SSSCA1O60232 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.68■□□□□ 0.1
SSSCA1O60232 AC016405.3-201ENST00000607710 860 ntBASIC15.68■□□□□ 0.1
SSSCA1O60232 AC105020.6-201ENST00000621523 1217 ntBASIC15.68■□□□□ 0.1
SSSCA1O60232 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSSCA1O60232 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SSSCA1O60232 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.68■□□□□ 0.1
SSSCA1O60232 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSSCA1O60232 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.67■□□□□ 0.1
SSSCA1O60232 NOC2LP1-202ENST00000452600 2235 ntBASIC15.67■□□□□ 0.1
SSSCA1O60232 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SSSCA1O60232 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.67■□□□□ 0.1
SSSCA1O60232 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.67■□□□□ 0.1
SSSCA1O60232 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.67■□□□□ 0.1
SSSCA1O60232 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.67■□□□□ 0.1
SSSCA1O60232 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.67■□□□□ 0.1
SSSCA1O60232 AC142381.2-201ENST00000566120 298 ntBASIC15.67■□□□□ 0.1
SSSCA1O60232 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.67■□□□□ 0.1
SSSCA1O60232 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.67■□□□□ 0.1
SSSCA1O60232 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSSCA1O60232 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.67■□□□□ 0.1
SSSCA1O60232 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SSSCA1O60232 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms