Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PHGDHO43175 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.12■□□□□ 0.65
PHGDHO43175 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.12■□□□□ 0.65
PHGDHO43175 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PHGDHO43175 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.12■□□□□ 0.65
PHGDHO43175 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.12■□□□□ 0.65
PHGDHO43175 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.12■□□□□ 0.65
PHGDHO43175 KRT18P16-201ENST00000510337 1294 ntBASIC19.12■□□□□ 0.65
PHGDHO43175 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.12■□□□□ 0.65
PHGDHO43175 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.12■□□□□ 0.65
PHGDHO43175 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.12■□□□□ 0.65
PHGDHO43175 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.12■□□□□ 0.65
PHGDHO43175 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.12■□□□□ 0.65
PHGDHO43175 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.12■□□□□ 0.65
PHGDHO43175 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.12■□□□□ 0.65
PHGDHO43175 AC104771.1-201ENST00000603335 964 ntBASIC19.12■□□□□ 0.65
PHGDHO43175 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.12■□□□□ 0.65
PHGDHO43175 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.12■□□□□ 0.65
PHGDHO43175 AL121829.2-201ENST00000620908 328 ntBASIC19.12■□□□□ 0.65
PHGDHO43175 AC133041.1-202ENST00000642053 222 ntBASIC19.12■□□□□ 0.65
PHGDHO43175 AC138932.1-201ENST00000534164 6830 ntBASIC19.12■□□□□ 0.65
PHGDHO43175 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
PHGDHO43175 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.11■□□□□ 0.65
PHGDHO43175 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PHGDHO43175 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.11■□□□□ 0.65
PHGDHO43175 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PHGDHO43175 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PHGDHO43175 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.11■□□□□ 0.65
PHGDHO43175 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
PHGDHO43175 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.11■□□□□ 0.65
PHGDHO43175 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.11■□□□□ 0.65
PHGDHO43175 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.11■□□□□ 0.65
PHGDHO43175 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PHGDHO43175 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.11■□□□□ 0.65
PHGDHO43175 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PHGDHO43175 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PHGDHO43175 FP475955.4-201ENST00000623131 1990 ntBASIC19.11■□□□□ 0.65
PHGDHO43175 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHGDHO43175 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PHGDHO43175 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 AL138781.2-201ENST00000617896 1843 ntBASIC19.1■□□□□ 0.65
PHGDHO43175 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
PHGDHO43175 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.1■□□□□ 0.65
PHGDHO43175 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.1■□□□□ 0.65
PHGDHO43175 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.1■□□□□ 0.65
PHGDHO43175 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHGDHO43175 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.1■□□□□ 0.65
PHGDHO43175 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.1■□□□□ 0.65
PHGDHO43175 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PHGDHO43175 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.09■□□□□ 0.65
PHGDHO43175 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PHGDHO43175 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PHGDHO43175 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PHGDHO43175 TUBB8P6-201ENST00000436895 1288 ntBASIC19.09■□□□□ 0.65
PHGDHO43175 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.09■□□□□ 0.65
PHGDHO43175 AC142086.2-201ENST00000569753 217 ntBASIC19.09■□□□□ 0.65
PHGDHO43175 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms