Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDH17O14917 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDH17O14917 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH17O14917 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDH17O14917 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH17O14917 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH17O14917 AL445675.2-201ENST00000620291 557 ntBASIC18.36■□□□□ 0.53
PCDH17O14917 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH17O14917 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH17O14917 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH17O14917 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH17O14917 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.35■□□□□ 0.53
PCDH17O14917 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH17O14917 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH17O14917 NUDT16P1-203ENST00000513809 620 ntBASIC18.35■□□□□ 0.53
PCDH17O14917 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH17O14917 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH17O14917 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH17O14917 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH17O14917 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH17O14917 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH17O14917 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH17O14917 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH17O14917 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH17O14917 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDH17O14917 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH17O14917 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDH17O14917 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PCDH17O14917 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDH17O14917 AP003071.4-201ENST00000562276 1284 ntBASIC18.34■□□□□ 0.53
PCDH17O14917 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PCDH17O14917 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDH17O14917 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH17O14917 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH17O14917 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH17O14917 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH17O14917 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
PCDH17O14917 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH17O14917 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
PCDH17O14917 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDH17O14917 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH17O14917 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDH17O14917 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDH17O14917 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDH17O14917 AL031985.4-201ENST00000642138 673 ntBASIC18.33■□□□□ 0.52
PCDH17O14917 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDH17O14917 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PCDH17O14917 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
PCDH17O14917 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms