Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TSPAN4O14817 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
TSPAN4O14817 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.12■□□□□ 0.17
TSPAN4O14817 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TSPAN4O14817 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TSPAN4O14817 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TSPAN4O14817 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TSPAN4O14817 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.11■□□□□ 0.17
TSPAN4O14817 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TSPAN4O14817 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TSPAN4O14817 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.11■□□□□ 0.17
TSPAN4O14817 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.11■□□□□ 0.17
TSPAN4O14817 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 MST1L-201ENST00000442552 2185 ntBASIC16.11■□□□□ 0.17
TSPAN4O14817 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TSPAN4O14817 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TSPAN4O14817 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.11■□□□□ 0.17
TSPAN4O14817 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.11■□□□□ 0.17
TSPAN4O14817 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.11■□□□□ 0.17
TSPAN4O14817 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSPAN4O14817 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.1■□□□□ 0.17
TSPAN4O14817 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TSPAN4O14817 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.1■□□□□ 0.17
TSPAN4O14817 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.1■□□□□ 0.17
TSPAN4O14817 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TSPAN4O14817 RARRES2P6-201ENST00000567333 442 ntBASIC16.1■□□□□ 0.17
TSPAN4O14817 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.1■□□□□ 0.17
TSPAN4O14817 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TSPAN4O14817 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TSPAN4O14817 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSPAN4O14817 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TSPAN4O14817 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 AP006587.3-201ENST00000525742 1516 ntBASIC16.09■□□□□ 0.17
TSPAN4O14817 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.09■□□□□ 0.17
TSPAN4O14817 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TSPAN4O14817 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TSPAN4O14817 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSPAN4O14817 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TSPAN4O14817 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TSPAN4O14817 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.09■□□□□ 0.17
TSPAN4O14817 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.09■□□□□ 0.17
TSPAN4O14817 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms