Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC040169.1-201ENST00000565382 521 ntBASIC18.17■□□□□ 0.5
CACNA1AO00555 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1AO00555 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNA1AO00555 AC079602.3-201ENST00000623931 403 ntBASIC18.17■□□□□ 0.5
CACNA1AO00555 AL391807.1-203ENST00000604392 2365 ntBASIC18.17■□□□□ 0.5
CACNA1AO00555 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 AC036111.1-201ENST00000533973 1582 ntBASIC18.17■□□□□ 0.5
CACNA1AO00555 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1AO00555 AL596442.2-201ENST00000610240 980 ntBASIC18.17■□□□□ 0.5
CACNA1AO00555 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.17■□□□□ 0.5
CACNA1AO00555 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CACNA1AO00555 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1AO00555 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1AO00555 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.16■□□□□ 0.5
CACNA1AO00555 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.16■□□□□ 0.5
CACNA1AO00555 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.16■□□□□ 0.5
CACNA1AO00555 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.16■□□□□ 0.5
CACNA1AO00555 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1AO00555 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1AO00555 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 KRT18P3-201ENST00000451602 1288 ntBASIC18.16■□□□□ 0.5
CACNA1AO00555 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1AO00555 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CACNA1AO00555 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.16■□□□□ 0.5
CACNA1AO00555 AC011467.4-201ENST00000594891 528 ntBASIC18.16■□□□□ 0.5
CACNA1AO00555 AC116407.3-201ENST00000623905 1129 ntBASIC18.16■□□□□ 0.5
CACNA1AO00555 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1AO00555 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1AO00555 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA1AO00555 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA1AO00555 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.15■□□□□ 0.5
CACNA1AO00555 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA1AO00555 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CACNA1AO00555 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA1AO00555 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA1AO00555 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.15■□□□□ 0.5
CACNA1AO00555 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.15■□□□□ 0.5
CACNA1AO00555 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CACNA1AO00555 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA1AO00555 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.15■□□□□ 0.5
CACNA1AO00555 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA1AO00555 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA1AO00555 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA1AO00555 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA1AO00555 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CACNA1AO00555 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA1AO00555 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA1AO00555 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CACNA1AO00555 AL160286.2-201ENST00000567150 934 ntBASIC18.15■□□□□ 0.5
CACNA1AO00555 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA1AO00555 AC024243.1-201ENST00000609234 778 ntBASIC18.15■□□□□ 0.5
CACNA1AO00555 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA1AO00555 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA1AO00555 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CACNA1AO00555 AC080038.3-201ENST00000623346 1952 ntBASIC18.14■□□□□ 0.5
CACNA1AO00555 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA1AO00555 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA1AO00555 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.14■□□□□ 0.49
CACNA1AO00555 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CACNA1AO00555 AL008721.1-201ENST00000609964 604 ntBASIC18.14■□□□□ 0.49
CACNA1AO00555 LINC01465-201ENST00000408887 1940 ntBASIC18.14■□□□□ 0.49
CACNA1AO00555 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA1AO00555 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA1AO00555 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA1AO00555 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA1AO00555 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.14■□□□□ 0.49
CACNA1AO00555 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.14■□□□□ 0.49
CACNA1AO00555 BNIP3P18-201ENST00000593976 575 ntBASIC18.14■□□□□ 0.49
CACNA1AO00555 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CACNA1AO00555 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.14■□□□□ 0.49
CACNA1AO00555 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA1AO00555 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1AO00555 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
CACNA1AO00555 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CACNA1AO00555 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1AO00555 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1AO00555 AC002347.1-201ENST00000569543 541 ntBASIC18.13■□□□□ 0.49
CACNA1AO00555 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1AO00555 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1AO00555 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms