Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC1O00299 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIC1O00299 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC1O00299 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC1O00299 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC1O00299 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC1O00299 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIC1O00299 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIC1O00299 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIC1O00299 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIC1O00299 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.13■□□□□ 0.49
CLIC1O00299 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.13■□□□□ 0.49
CLIC1O00299 HLA-B-256ENST00000639848 1089 ntBASIC18.13■□□□□ 0.49
CLIC1O00299 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 IRX1P1-201ENST00000438849 1838 ntBASIC18.13■□□□□ 0.49
CLIC1O00299 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIC1O00299 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC1O00299 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIC1O00299 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 AL031598.1-201ENST00000561511 1773 ntBASIC18.12■□□□□ 0.49
CLIC1O00299 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 AC104581.1-202ENST00000635932 2618 ntBASIC18.12■□□□□ 0.49
CLIC1O00299 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLIC1O00299 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 SLC29A4P1-201ENST00000398760 971 ntBASIC18.12■□□□□ 0.49
CLIC1O00299 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.12■□□□□ 0.49
CLIC1O00299 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIC1O00299 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLIC1O00299 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIC1O00299 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CLIC1O00299 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIC1O00299 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIC1O00299 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLIC1O00299 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.11■□□□□ 0.49
CLIC1O00299 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.11■□□□□ 0.49
CLIC1O00299 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.11■□□□□ 0.49
CLIC1O00299 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.11■□□□□ 0.49
CLIC1O00299 AC097658.1-201ENST00000475555 843 ntBASIC18.11■□□□□ 0.49
CLIC1O00299 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.11■□□□□ 0.49
CLIC1O00299 MIR4758-201ENST00000577688 71 ntBASIC18.11■□□□□ 0.49
CLIC1O00299 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.11■□□□□ 0.49
CLIC1O00299 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CLIC1O00299 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLIC1O00299 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CLIC1O00299 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLIC1O00299 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIC1O00299 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLIC1O00299 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLIC1O00299 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.1■□□□□ 0.49
CLIC1O00299 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
CLIC1O00299 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
CLIC1O00299 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLIC1O00299 Z98044.1-201ENST00000632503 1764 ntBASIC18.1■□□□□ 0.49
CLIC1O00299 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLIC1O00299 AC093525.10-201ENST00000625130 1569 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms