Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 AC026471.6-201ENST00000622954 1905 ntBASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 AL731571.1-201ENST00000617058 5428 ntBASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 RNF166-209ENST00000567844 633 ntTSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CHKB-CPT1BH3BT56 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 FP325331.1-202ENST00000623531 1380 ntBASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 PCDHA12-202ENST00000613593 2588 ntBASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 AC011551.1-201ENST00000614101 683 ntBASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms