Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 AFG3L1P-217ENST00000557444 2447 ntBASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA3F8WFD2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA3F8WFD2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 C2orf69P3-201ENST00000565542 1120 ntBASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 SLC25A1P4-201ENST00000567977 778 ntBASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 DGCR10-201ENST00000609839 495 ntBASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 AC092865.7-201ENST00000641832 219 ntBASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA3F8WFD2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 KRT8P8-201ENST00000434750 1448 ntBASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 AC113347.1-201ENST00000413321 391 ntBASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 AL137013.1-201ENST00000432946 1228 ntBASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 KRT18P57-201ENST00000443599 1254 ntBASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 AC011298.2-201ENST00000617989 482 ntBASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA3F8WFD2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms