Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 REXO1L12P-201ENST00000622156 912 ntBASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AL353807.1-201ENST00000427475 662 ntBASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC113410.3-201ENST00000623366 203 ntBASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC004408.2-201ENST00000623613 2777 ntBASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV4S1A1TA0A5B7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms