Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 AC067852.2-201ENST00000590513 2313 ntBASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRDV1A0A1B0GX56 SDHAP1-207ENST00000440850 2000 ntBASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 AC104417.2-201ENST00000562989 1793 ntBASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 AC008406.3-201ENST00000620001 1374 ntBASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRDV1A0A1B0GX56 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 RARRES2P4-201ENST00000514074 484 ntBASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRDV1A0A1B0GX56 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.9■□□□□ 0.3
TRDV1A0A1B0GX56 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms