Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 UNC93B2-201ENST00000285383 730 ntBASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AC011298.2-201ENST00000617989 482 ntBASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 TSPY21P-201ENST00000433481 731 ntBASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 FAM207BP-201ENST00000447172 505 ntBASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 AP000692.2-201ENST00000608391 879 ntBASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 REXO1L10P-201ENST00000615707 1290 ntBASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 REXO1L12P-201ENST00000622156 912 ntBASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV25A0A0B4J276 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 PRSS44-201ENST00000515154 1146 ntBASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV25A0A0B4J276 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms