Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ANO7L1-203ENST00000602586 1720 ntBASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 AC010141.2-201ENST00000452426 721 ntBASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 CDV3P1-201ENST00000471403 739 ntBASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV12-1A0A0B4J245 GNAS-203ENST00000306120 1878 ntBASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV12-1A0A0B4J245 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 AC073592.3-201ENST00000625118 1834 ntBASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms