Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF507-202ENST00000355898 3194 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-3Q9BYR6 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RNU6-1010P-201ENST00000362757 107 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SKP186-201ENST00000365371 303 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RNA5SP235-201ENST00000365411 114 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 MIR154-201ENST00000385243 84 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 HBA1-202ENST00000397797 504 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 COX6A1P3-201ENST00000404167 293 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 POLR2J4-204ENST00000418424 324 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 TOMM22P1-201ENST00000418578 312 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC012354.2-201ENST00000423051 461 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 IFNWP5-201ENST00000445100 588 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 KRTAP19-10P-201ENST00000445258 187 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 LINC01627-201ENST00000452923 243 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RN7SL484P-201ENST00000462651 202 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 IGKV1-6-201ENST00000464162 380 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC020658.1-201ENST00000471253 938 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 IGKV1-5-201ENST00000496168 532 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC073111.1-201ENST00000497366 420 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC091180.2-203ENST00000507337 601 ntTSL 4 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 UBL5P1-201ENST00000507979 193 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC233724.11-201ENST00000508480 404 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RNU6-977P-201ENST00000516411 103 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RNA5SP206-201ENST00000516703 121 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RNU6-1282P-201ENST00000516735 96 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RNU6-1098P-201ENST00000516772 96 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC021739.1-201ENST00000559631 174 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 MIR4716-201ENST00000579628 84 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC233702.9-201ENST00000581528 203 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC091393.1-201ENST00000605088 598 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 BSNDP1-201ENST00000613026 367 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AL118508.2-201ENST00000622708 673 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC021613.1-201ENST00000623880 111 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC135068.9-201ENST00000628927 355 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ZBBX-203ENST00000392766 3250 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AP000866.6-201ENST00000638898 3579 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 AC131392.2-201ENST00000505635 4332 ntBASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ST5-237ENST00000530991 3396 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-3Q9BYR6 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-3Q9BYR6 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms