Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 HMGB1P10-201ENST00000395823 563 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC126177.3-201ENST00000551839 688 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 RN7SKP272-201ENST00000516988 232 ntBASIC2.65□□□□□ -1.98
CHD8Q9HCK8 SCARNA20.6-201ENST00000517251 106 ntBASIC2.65□□□□□ -1.98
CHD8Q9HCK8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 AC128687.1-201ENST00000605304 619 ntBASIC2.65□□□□□ -1.98
CHD8Q9HCK8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.65□□□□□ -1.98
CHD8Q9HCK8 AL136964.1-201ENST00000622038 2990 ntBASIC2.65□□□□□ -1.98
CHD8Q9HCK8 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNA5SP37-201ENST00000365420 130 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-1-201ENST00000383898 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-42P-201ENST00000384165 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-36P-201ENST00000384172 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-4P-201ENST00000384205 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-5P-201ENST00000384238 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-3P-201ENST00000384314 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-2-201ENST00000384627 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-9-201ENST00000384776 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-33P-201ENST00000384793 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AC126124.2-201ENST00000413542 321 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 ETF1P3-201ENST00000430422 1160 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 MRPS18BP2-201ENST00000434310 759 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 ISCA1P2-201ENST00000438679 421 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AC107934.2-201ENST00000518653 310 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 DPRXP4-201ENST00000578053 568 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AC022884.3-201ENST00000579571 248 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 RNU6-6P-201ENST00000606623 107 ntBASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHD8Q9HCK8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 MIR448-201ENST00000362131 111 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 SNORD114-30-201ENST00000364448 72 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 NPM1P37-201ENST00000403105 874 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 YWHAQP9-201ENST00000445891 512 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AL024509.2-201ENST00000493462 493 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AC005840.1-201ENST00000498412 377 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AC104454.1-201ENST00000421341 1401 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 SNORA26.9-201ENST00000391322 122 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 TVP23BP2-201ENST00000455082 615 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 UBTFL10-201ENST00000528532 562 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 NPM1P35-201ENST00000533043 868 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AC026241.1-201ENST00000517873 2142 ntBASIC2.64□□□□□ -1.99
CHD8Q9HCK8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHD8Q9HCK8 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 MTND4P2-201ENST00000507767 1203 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC006445.2-201ENST00000510061 472 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC063952.1-203ENST00000634410 658 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms