RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 NISCHQ9Y2I1 1504 aa7.19□□□□□ -1.26
RAB3C-201ENST00000282878 DCAF8L2P0C7V8 631 aa6.82□□□□□ -1.32
RAB3C-201ENST00000282878 SHROOM4Q9ULL8 1493 aa6.78□□□□□ -1.32
RAB3C-201ENST00000282878 SUPT5HO00267 1087 aaKnown RBP6.64□□□□□ -1.35
RAB3C-201ENST00000282878 SLC24A1O60721 1099 aa6.63□□□□□ -1.35
RAB3C-201ENST00000282878 MYT1Q01538 1121 aa6.48□□□□□ -1.37
RAB3C-201ENST00000282878 EHMT2Q96KQ7 1210 aa6.44□□□□□ -1.38
RAB3C-201ENST00000282878 TTBK1Q5TCY1 1321 aaPredicted RBP6.29□□□□□ -1.4
RAB3C-201ENST00000282878 PELP1Q8IZL8 1130 aaKnown RBP6.27□□□□□ -1.41
RAB3C-201ENST00000282878 CHIC1Q5VXU3 224 aa6.27□□□□□ -1.41
RAB3C-201ENST00000282878 FAM9AQ8IZU1 332 aaPredicted RBP6.26□□□□□ -1.41
RAB3C-201ENST00000282878 RANGAP1P46060 587 aaPredicted RBP6.24□□□□□ -1.41
RAB3C-201ENST00000282878 LOC105371045A0A1W2PR82 267 aa6.2□□□□□ -1.42
RAB3C-201ENST00000282878 ERICH6Q7L0X2 663 aa6.18□□□□□ -1.42
RAB3C-201ENST00000282878 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.42
RAB3C-201ENST00000282878 ABCC9O60706 1549 aa6.14□□□□□ -1.43
RAB3C-201ENST00000282878 PABPN1Q86U42 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
RAB3C-201ENST00000282878 PCGF6Q9BYE7 350 aa6.08□□□□□ -1.44
RAB3C-201ENST00000282878 AMER1Q5JTC6 1135 aaPredicted RBP6.05□□□□□ -1.44
RAB3C-201ENST00000282878 MYO15BQ96JP2 1530 aa6.04□□□□□ -1.44
RAB3C-201ENST00000282878 CCDC180Q9P1Z9 1646 aa6.04□□□□□ -1.44
RAB3C-201ENST00000282878 ZCCHC6Q5VYS8 1495 aaKnown RBP6.02□□□□□ -1.45
RAB3C-201ENST00000282878 DAXXQ9UER7 740 aaPredicted RBP6.02□□□□□ -1.45
RAB3C-201ENST00000282878 TRIM41Q8WV44 630 aa5.98□□□□□ -1.45
RAB3C-201ENST00000282878 DCAF1Q9Y4B6 1507 aa5.92□□□□□ -1.46
RAB3C-201ENST00000282878 CECR2Q9BXF3 1484 aa5.9□□□□□ -1.47
RAB3C-201ENST00000282878 NCBP3Q53F19 620 aaKnown RBP5.88□□□□□ -1.47
RAB3C-201ENST00000282878 RTN4Q9NQC3 1192 aaKnown RBP5.88□□□□□ -1.47
RAB3C-201ENST00000282878 SCRIBQ14160 1630 aa5.86□□□□□ -1.47
RAB3C-201ENST00000282878 RSF1Q96T23 1441 aaPredicted RBP5.85□□□□□ -1.47
RAB3C-201ENST00000282878 PLPPR3Q6T4P5 718 aa5.81□□□□□ -1.48
RAB3C-201ENST00000282878 HRCP23327 699 aa5.8□□□□□ -1.48
RAB3C-201ENST00000282878 ARXQ96QS3 562 aa5.79□□□□□ -1.48
RAB3C-201ENST00000282878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.79□□□□□ -1.48
RAB3C-201ENST00000282878 UBTFP17480 764 aaKnown RBP5.78□□□□□ -1.48
RAB3C-201ENST00000282878 HOMEZQ8IX15 550 aa5.75□□□□□ -1.49
RAB3C-201ENST00000282878 BCANQ96GW7 911 aa5.75□□□□□ -1.49
RAB3C-201ENST00000282878 MROH2BQ7Z745 1585 aa5.73□□□□□ -1.49
RAB3C-201ENST00000282878 HNRNPUL2Q1KMD3 747 aaKnown RBP5.73□□□□□ -1.49
RAB3C-201ENST00000282878 NACADO15069 1562 aa5.73□□□□□ -1.49
RAB3C-201ENST00000282878 HAP1P54257 671 aaPredicted RBP5.73□□□□□ -1.49
RAB3C-201ENST00000282878 DNAJC5BQ9UF47 199 aa5.72□□□□□ -1.49
RAB3C-201ENST00000282878 TRIM26Q12899 539 aaPredicted RBP5.71□□□□□ -1.5
RAB3C-201ENST00000282878 ITGAEP38570 1179 aa5.7□□□□□ -1.5
RAB3C-201ENST00000282878 ATP1B4Q9UN42 357 aaPredicted RBP5.7□□□□□ -1.5
RAB3C-201ENST00000282878 P3H3Q8IVL6 736 aa5.69□□□□□ -1.5
RAB3C-201ENST00000282878 SOGA1O94964 1423 aa5.68□□□□□ -1.5
RAB3C-201ENST00000282878 ARID3CA6NKF2 412 aa5.67□□□□□ -1.5
RAB3C-201ENST00000282878 TULP1O00294 542 aaPredicted RBP5.67□□□□□ -1.5
RAB3C-201ENST00000282878 RUSC2Q8N2Y8 1516 aa5.66□□□□□ -1.5
RAB3C-201ENST00000282878 CCER1Q8TC90 406 aaPredicted RBP5.66□□□□□ -1.5
RAB3C-201ENST00000282878 PRKCSHP14314 528 aaPredicted RBP5.66□□□□□ -1.5
RAB3C-201ENST00000282878 EIF5BO60841 1220 aaKnown RBP5.66□□□□□ -1.5
RAB3C-201ENST00000282878 SLC4A1APQ9BWU0 796 aaKnown RBP5.65□□□□□ -1.5
RAB3C-201ENST00000282878 RB1CC1Q8TDY2 1594 aa5.65□□□□□ -1.5
RAB3C-201ENST00000282878 CSRNP3Q8WYN3 585 aa5.65□□□□□ -1.5
RAB3C-201ENST00000282878 TPRNQ4KMQ1 711 aa5.63□□□□□ -1.51
RAB3C-201ENST00000282878 CCDC88BA6NC98 1476 aa5.63□□□□□ -1.51
RAB3C-201ENST00000282878 AEBP2Q6ZN18 517 aaPredicted RBP5.62□□□□□ -1.51
RAB3C-201ENST00000282878 YTHDC1Q96MU7 727 aaKnown RBP5.62□□□□□ -1.51
RAB3C-201ENST00000282878 ABCC8Q09428 1581 aa5.61□□□□□ -1.51
RAB3C-201ENST00000282878 PODXL2Q9NZ53 605 aa5.61□□□□□ -1.51
RAB3C-201ENST00000282878 KCNA4P22459 653 aa5.59□□□□□ -1.51
RAB3C-201ENST00000282878 C14orf37Q86TY3 774 aa5.58□□□□□ -1.52
RAB3C-201ENST00000282878 TAOK2Q9UL54 1235 aa5.58□□□□□ -1.52
RAB3C-201ENST00000282878 NPM2Q86SE8 214 aaKnown RBP5.56□□□□□ -1.52
RAB3C-201ENST00000282878 APLP2Q06481 763 aa5.55□□□□□ -1.52
RAB3C-201ENST00000282878 KANK4Q5T7N3 995 aaPredicted RBP5.55□□□□□ -1.52
RAB3C-201ENST00000282878 WIZO95785 1651 aa5.55□□□□□ -1.52
RAB3C-201ENST00000282878 GTF3C3Q9Y5Q9 886 aa5.53□□□□□ -1.52
RAB3C-201ENST00000282878 BICRAQ9NZM4 1560 aa5.53□□□□□ -1.52
RAB3C-201ENST00000282878 HIRIP3Q9BW71 556 aaPredicted RBP5.52□□□□□ -1.53
RAB3C-201ENST00000282878 CNGB1Q14028 1251 aaPredicted RBP5.52□□□□□ -1.53
RAB3C-201ENST00000282878 CEP162Q5TB80 1403 aa5.51□□□□□ -1.53
RAB3C-201ENST00000282878 WRNQ14191 1432 aaPredicted RBP eCLIP5.51□□□□□ -1.53
RAB3C-201ENST00000282878 TIMELESSQ9UNS1 1208 aa5.5□□□□□ -1.53
RAB3C-201ENST00000282878 HMGB1P09429 215 aaKnown RBP5.49□□□□□ -1.53
RAB3C-201ENST00000282878 POLR3GLQ9BT43 218 aa5.49□□□□□ -1.53
RAB3C-201ENST00000282878 NEUROD1Q13562 356 aa5.49□□□□□ -1.53
RAB3C-201ENST00000282878 FAM50AQ14320 339 aaKnown RBP5.49□□□□□ -1.53
RAB3C-201ENST00000282878 FBLN2P98095 1184 aa5.47□□□□□ -1.53
RAB3C-201ENST00000282878 ATAD2BQ9ULI0 1458 aa5.47□□□□□ -1.53
RAB3C-201ENST00000282878 SENP3-EIF4A1A0A087X0R7 540 aa5.46□□□□□ -1.53
RAB3C-201ENST00000282878 CDK11BP21127 795 aaKnown RBP5.45□□□□□ -1.54
RAB3C-201ENST00000282878 CDK11AQ9UQ88 783 aaPredicted RBP5.45□□□□□ -1.54
RAB3C-201ENST00000282878 BAZ1BQ9UIG0 1483 aaKnown RBP5.45□□□□□ -1.54
RAB3C-201ENST00000282878 CHIC2Q9UKJ5 165 aa5.45□□□□□ -1.54
RAB3C-201ENST00000282878 BAZ1AQ9NRL2 1556 aaPredicted RBP5.44□□□□□ -1.54
RAB3C-201ENST00000282878 SIN3AQ96ST3 1273 aa5.44□□□□□ -1.54
RAB3C-201ENST00000282878 NBR1Q14596 966 aa5.44□□□□□ -1.54
RAB3C-201ENST00000282878 TDRD9Q8NDG6 1382 aaKnown RBP5.44□□□□□ -1.54
RAB3C-201ENST00000282878 DIEXFQ68CQ4 756 aaKnown RBP5.43□□□□□ -1.54
RAB3C-201ENST00000282878 RAPGEF2Q9Y4G8 1499 aa5.43□□□□□ -1.54
RAB3C-201ENST00000282878 PHF23Q9BUL5 403 aaPredicted RBP5.43□□□□□ -1.54
RAB3C-201ENST00000282878 CLIP1P30622 1438 aa5.43□□□□□ -1.54
RAB3C-201ENST00000282878 TNIKQ9UKE5 1360 aa5.42□□□□□ -1.54
RAB3C-201ENST00000282878 SCAF1Q9H7N4 1312 aaKnown RBP5.42□□□□□ -1.54
RAB3C-201ENST00000282878 MIER1Q8N108 512 aa5.42□□□□□ -1.54
RAB3C-201ENST00000282878 PLCB2Q00722 1185 aa5.41□□□□□ -1.54
RAB3C-201ENST00000282878 SMARCA2P51531 1590 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms