RNA–Protein interactions for RNA: ENST00000530214.5

C11orf1-204, Transcript of chromosome 11 open reading frame 1, humanhuman

TSL 5 BASIC

Gene C11orf1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-204ENST00000530214 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
C11orf1-204ENST00000530214 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
C11orf1-204ENST00000530214 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
C11orf1-204ENST00000530214 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
C11orf1-204ENST00000530214 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
C11orf1-204ENST00000530214 FOXD1Q16676 465 aa19.76■□□□□ 0.75
C11orf1-204ENST00000530214 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
C11orf1-204ENST00000530214 MSH5O43196 834 aa18.63■□□□□ 0.57
C11orf1-204ENST00000530214 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
C11orf1-204ENST00000530214 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
C11orf1-204ENST00000530214 ADRA2BP18089 450 aa18.41■□□□□ 0.54
C11orf1-204ENST00000530214 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
C11orf1-204ENST00000530214 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
C11orf1-204ENST00000530214 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
C11orf1-204ENST00000530214 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
C11orf1-204ENST00000530214 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
C11orf1-204ENST00000530214 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
C11orf1-204ENST00000530214 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
C11orf1-204ENST00000530214 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
C11orf1-204ENST00000530214 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
C11orf1-204ENST00000530214 POTEHQ6S545 545 aa15.98■□□□□ 0.15
C11orf1-204ENST00000530214 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
C11orf1-204ENST00000530214 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
C11orf1-204ENST00000530214 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
C11orf1-204ENST00000530214 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
C11orf1-204ENST00000530214 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
C11orf1-204ENST00000530214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.06
C11orf1-204ENST00000530214 KCNA4P22459 653 aa15.38■□□□□ 0.05
C11orf1-204ENST00000530214 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
C11orf1-204ENST00000530214 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
C11orf1-204ENST00000530214 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
C11orf1-204ENST00000530214 CAPN15O75808 1086 aa14.85□□□□□ -0.03
C11orf1-204ENST00000530214 DSG3P32926 999 aa14.78□□□□□ -0.04
C11orf1-204ENST00000530214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
C11orf1-204ENST00000530214 APLP2Q06481 763 aa14.69□□□□□ -0.06
C11orf1-204ENST00000530214 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
C11orf1-204ENST00000530214 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
C11orf1-204ENST00000530214 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
C11orf1-204ENST00000530214 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
C11orf1-204ENST00000530214 ABCB7O75027 752 aa14.51□□□□□ -0.09
C11orf1-204ENST00000530214 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
C11orf1-204ENST00000530214 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
C11orf1-204ENST00000530214 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
C11orf1-204ENST00000530214 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
C11orf1-204ENST00000530214 POLA2Q14181 598 aa14.23□□□□□ -0.13
C11orf1-204ENST00000530214 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
C11orf1-204ENST00000530214 ZBTB22O15209 634 aa14.15□□□□□ -0.14
C11orf1-204ENST00000530214 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
C11orf1-204ENST00000530214 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
C11orf1-204ENST00000530214 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
C11orf1-204ENST00000530214 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
C11orf1-204ENST00000530214 PLSCR2Q9NRY7 297 aa13.84□□□□□ -0.19
C11orf1-204ENST00000530214 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
C11orf1-204ENST00000530214 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
C11orf1-204ENST00000530214 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
C11orf1-204ENST00000530214 FBLN2P98095 1184 aa13.6□□□□□ -0.23
C11orf1-204ENST00000530214 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
C11orf1-204ENST00000530214 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
C11orf1-204ENST00000530214 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
C11orf1-204ENST00000530214 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
C11orf1-204ENST00000530214 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
C11orf1-204ENST00000530214 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
C11orf1-204ENST00000530214 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
C11orf1-204ENST00000530214 HAX1O00165 279 aa13.43□□□□□ -0.26
C11orf1-204ENST00000530214 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
C11orf1-204ENST00000530214 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
C11orf1-204ENST00000530214 LHX8Q68G74 356 aa13.35□□□□□ -0.27
C11orf1-204ENST00000530214 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
C11orf1-204ENST00000530214 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
C11orf1-204ENST00000530214 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
C11orf1-204ENST00000530214 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
C11orf1-204ENST00000530214 PRKAR2AP13861 404 aaKnown RBP13.15□□□□□ -0.3
C11orf1-204ENST00000530214 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
C11orf1-204ENST00000530214 EVX2Q03828 476 aa13.08□□□□□ -0.32
C11orf1-204ENST00000530214 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
C11orf1-204ENST00000530214 CHADLQ6NUI6 762 aa13□□□□□ -0.33
C11orf1-204ENST00000530214 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
C11orf1-204ENST00000530214 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
C11orf1-204ENST00000530214 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
C11orf1-204ENST00000530214 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
C11orf1-204ENST00000530214 GABBR2O75899 941 aa12.77□□□□□ -0.37
C11orf1-204ENST00000530214 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
C11orf1-204ENST00000530214 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
C11orf1-204ENST00000530214 POTEMA6NI47 508 aa12.67□□□□□ -0.38
C11orf1-204ENST00000530214 PROM2Q8N271 834 aa12.59□□□□□ -0.39
C11orf1-204ENST00000530214 CLCN6P51797 869 aa12.57□□□□□ -0.4
C11orf1-204ENST00000530214 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
C11orf1-204ENST00000530214 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
C11orf1-204ENST00000530214 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
C11orf1-204ENST00000530214 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
C11orf1-204ENST00000530214 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
C11orf1-204ENST00000530214 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
C11orf1-204ENST00000530214 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
C11orf1-204ENST00000530214 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
C11orf1-204ENST00000530214 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
C11orf1-204ENST00000530214 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
C11orf1-204ENST00000530214 PHF12Q96QT6 1004 aa12.37□□□□□ -0.43
C11orf1-204ENST00000530214 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
C11orf1-204ENST00000530214 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
C11orf1-204ENST00000530214 MIER1Q8N108 512 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms