RNA–Protein interactions for RNA: ENST00000516988.1

RN7SKP272-201, Transcript of RNA, 7SK small nuclear pseudogene 272, humanhuman

BASIC

Gene RN7SKP272, Length 232 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP272-201ENST00000516988 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
RN7SKP272-201ENST00000516988 CHIC1Q5VXU3 224 aa14.05□□□□□ -0.16
RN7SKP272-201ENST00000516988 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
RN7SKP272-201ENST00000516988 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP272-201ENST00000516988 PLPPR3Q6T4P5 718 aa11.41□□□□□ -0.58
RN7SKP272-201ENST00000516988 FOXD1Q16676 465 aa11.35□□□□□ -0.59
RN7SKP272-201ENST00000516988 PPP6R1Q9UPN7 881 aa10.8□□□□□ -0.68
RN7SKP272-201ENST00000516988 ADRA2BP18089 450 aa10.75□□□□□ -0.69
RN7SKP272-201ENST00000516988 PIAS4Q8N2W9 510 aaPredicted RBP10.66□□□□□ -0.7
RN7SKP272-201ENST00000516988 MSH5O43196 834 aa10.64□□□□□ -0.71
RN7SKP272-201ENST00000516988 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
RN7SKP272-201ENST00000516988 PPP4R3CPQ6ZMV5 832 aa9.96□□□□□ -0.82
RN7SKP272-201ENST00000516988 DMRT2Q9Y5R5 561 aa9.82□□□□□ -0.84
RN7SKP272-201ENST00000516988 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
RN7SKP272-201ENST00000516988 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
RN7SKP272-201ENST00000516988 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP272-201ENST00000516988 POTEDQ86YR6 584 aa9.7□□□□□ -0.86
RN7SKP272-201ENST00000516988 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
RN7SKP272-201ENST00000516988 HOXD11P31277 338 aaPredicted RBP9.63□□□□□ -0.87
RN7SKP272-201ENST00000516988 DNAJC5BQ9UF47 199 aa9.59□□□□□ -0.87
RN7SKP272-201ENST00000516988 KCNA4P22459 653 aa9.55□□□□□ -0.88
RN7SKP272-201ENST00000516988 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.89
RN7SKP272-201ENST00000516988 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
RN7SKP272-201ENST00000516988 SLC4A1APQ9BWU0 796 aaKnown RBP9.12□□□□□ -0.95
RN7SKP272-201ENST00000516988 RNF39Q9H2S5 420 aa9.06□□□□□ -0.96
RN7SKP272-201ENST00000516988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
RN7SKP272-201ENST00000516988 C1QBPQ07021 282 aaKnown RBP9.02□□□□□ -0.97
RN7SKP272-201ENST00000516988 SLC4A2P04920 1241 aa9□□□□□ -0.97
RN7SKP272-201ENST00000516988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.93□□□□□ -0.98
RN7SKP272-201ENST00000516988 HNRNPUL2Q1KMD3 747 aaKnown RBP8.93□□□□□ -0.98
RN7SKP272-201ENST00000516988 FOXD4L1Q9NU39 408 aa8.93□□□□□ -0.98
RN7SKP272-201ENST00000516988 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.98
RN7SKP272-201ENST00000516988 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
RN7SKP272-201ENST00000516988 APLP2Q06481 763 aa8.88□□□□□ -0.99
RN7SKP272-201ENST00000516988 SAMD1Q6SPF0 538 aaPredicted RBP8.84□□□□□ -0.99
RN7SKP272-201ENST00000516988 CACNB1Q02641 598 aaPredicted RBP8.8□□□□□ -1
RN7SKP272-201ENST00000516988 ATXN8OSP0DMR3 200 aa8.77□□□□□ -1.01
RN7SKP272-201ENST00000516988 ZBTB22O15209 634 aa8.76□□□□□ -1.01
RN7SKP272-201ENST00000516988 CSRNP3Q8WYN3 585 aa8.7□□□□□ -1.02
RN7SKP272-201ENST00000516988 ZNF219Q9P2Y4 722 aaPredicted RBP8.69□□□□□ -1.02
RN7SKP272-201ENST00000516988 CAPN15O75808 1086 aa8.59□□□□□ -1.03
RN7SKP272-201ENST00000516988 EHMT2Q96KQ7 1210 aa8.59□□□□□ -1.03
RN7SKP272-201ENST00000516988 SPINK5Q9NQ38 1064 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP272-201ENST00000516988 DSG3P32926 999 aa8.55□□□□□ -1.04
RN7SKP272-201ENST00000516988 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
RN7SKP272-201ENST00000516988 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
RN7SKP272-201ENST00000516988 ZBTB12Q9Y330 459 aaPredicted RBP8.44□□□□□ -1.06
RN7SKP272-201ENST00000516988 POLA2Q14181 598 aa8.4□□□□□ -1.06
RN7SKP272-201ENST00000516988 ABCB7O75027 752 aa8.33□□□□□ -1.08
RN7SKP272-201ENST00000516988 FBLN2P98095 1184 aa8.27□□□□□ -1.09
RN7SKP272-201ENST00000516988 RBM42Q9BTD8 480 aaKnown RBP8.26□□□□□ -1.09
RN7SKP272-201ENST00000516988 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
RN7SKP272-201ENST00000516988 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
RN7SKP272-201ENST00000516988 MKRN4PQ13434 485 aaPredicted RBP8.16□□□□□ -1.1
RN7SKP272-201ENST00000516988 SPDYE2Q495Y8 402 aa8.16□□□□□ -1.1
RN7SKP272-201ENST00000516988 AKT1S1Q96B36 256 aa8.12□□□□□ -1.11
RN7SKP272-201ENST00000516988 OSCARQ8IYS5 282 aa8.07□□□□□ -1.12
RN7SKP272-201ENST00000516988 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
RN7SKP272-201ENST00000516988 ZNF692Q9BU19 519 aaPredicted RBP8.01□□□□□ -1.13
RN7SKP272-201ENST00000516988 SPDYE4A6NLX3 237 aa7.96□□□□□ -1.14
RN7SKP272-201ENST00000516988 PROM2Q8N271 834 aa7.96□□□□□ -1.14
RN7SKP272-201ENST00000516988 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
RN7SKP272-201ENST00000516988 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
RN7SKP272-201ENST00000516988 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
RN7SKP272-201ENST00000516988 PABPN1Q86U42 306 aaKnown RBP eCLIP7.87□□□□□ -1.15
RN7SKP272-201ENST00000516988 CHRDL2Q6WN34 429 aa7.83□□□□□ -1.16
RN7SKP272-201ENST00000516988 PITPNM1O00562 1244 aa7.82□□□□□ -1.16
RN7SKP272-201ENST00000516988 FKBP8Q14318 412 aa7.81□□□□□ -1.16
RN7SKP272-201ENST00000516988 FXR2P51116 673 aaKnown RBP eCLIP7.79□□□□□ -1.16
RN7SKP272-201ENST00000516988 FBXO3Q9UK99 471 aa7.76□□□□□ -1.17
RN7SKP272-201ENST00000516988 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
RN7SKP272-201ENST00000516988 CLEC11AQ9Y240 323 aa7.72□□□□□ -1.17
RN7SKP272-201ENST00000516988 POTEHQ6S545 545 aa7.69□□□□□ -1.18
RN7SKP272-201ENST00000516988 PIP4P2Q8N4L2 257 aa7.69□□□□□ -1.18
RN7SKP272-201ENST00000516988 PLEKHG5O94827 1062 aa7.62□□□□□ -1.19
RN7SKP272-201ENST00000516988 PRKAR2AP13861 404 aaKnown RBP7.62□□□□□ -1.19
RN7SKP272-201ENST00000516988 ZBTB47Q9UFB7 747 aaPredicted RBP7.62□□□□□ -1.19
RN7SKP272-201ENST00000516988 CREBZFQ9NS37 354 aa7.61□□□□□ -1.19
RN7SKP272-201ENST00000516988 NPM1P06748 294 aaKnown RBP eCLIP7.57□□□□□ -1.2
RN7SKP272-201ENST00000516988 FARP1Q9Y4F1 1045 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP272-201ENST00000516988 MNX1P50219 401 aaPredicted RBP7.55□□□□□ -1.2
RN7SKP272-201ENST00000516988 CLCN6P51797 869 aa7.55□□□□□ -1.2
RN7SKP272-201ENST00000516988 VASPP50552 380 aaPredicted RBP7.54□□□□□ -1.2
RN7SKP272-201ENST00000516988 MIER1Q8N108 512 aa7.53□□□□□ -1.2
RN7SKP272-201ENST00000516988 C19orf67A6NJJ6 358 aa7.51□□□□□ -1.21
RN7SKP272-201ENST00000516988 CHADLQ6NUI6 762 aa7.51□□□□□ -1.21
RN7SKP272-201ENST00000516988 PLCD3Q8N3E9 789 aa7.51□□□□□ -1.21
RN7SKP272-201ENST00000516988 HAX1O00165 279 aa7.43□□□□□ -1.22
RN7SKP272-201ENST00000516988 PAK3O75914 559 aaPredicted RBP7.42□□□□□ -1.22
RN7SKP272-201ENST00000516988 CD44P16070 742 aaKnown RBP7.4□□□□□ -1.22
RN7SKP272-201ENST00000516988 NUBP1P53384 320 aa7.4□□□□□ -1.22
RN7SKP272-201ENST00000516988 IFNLR1Q8IU57 520 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP272-201ENST00000516988 ZNF579Q8NAF0 562 aaKnown RBP7.39□□□□□ -1.23
RN7SKP272-201ENST00000516988 SP7Q8TDD2 431 aaPredicted RBP7.38□□□□□ -1.23
RN7SKP272-201ENST00000516988 GSE1Q14687 1217 aa7.37□□□□□ -1.23
RN7SKP272-201ENST00000516988 SPOCK2Q92563 424 aa7.37□□□□□ -1.23
RN7SKP272-201ENST00000516988 SGIP1Q9BQI5 828 aa7.37□□□□□ -1.23
RN7SKP272-201ENST00000516988 KLHL34Q8N239 644 aa7.36□□□□□ -1.23
RN7SKP272-201ENST00000516988 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
RN7SKP272-201ENST00000516988 TRIM41Q8WV44 630 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms