Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 SMPD5-203ENST00000639008 1464 ntBASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L13-201ENST00000554103 1267 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L4-201ENST00000566884 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L15-201ENST00000611059 1267 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L23-201ENST00000615195 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L24-201ENST00000617576 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L22-201ENST00000618238 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L20-201ENST00000619712 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L21-201ENST00000622058 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L10-201ENST00000622460 1267 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L28-201ENST00000623687 678 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 DUX4L25-201ENST00000624915 1269 ntBASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS1Q9Y6A9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 FLJ38576-201ENST00000623820 2459 ntBASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms