Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 NIFKP9-201ENST00000419265 221 ntBASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 GCSHP5-201ENST00000443090 522 ntBASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 AL158047.1-201ENST00000445918 881 ntBASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 AP002982.1-201ENST00000492365 877 ntBASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4E1Q9UPM8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 RARRES2P10-201ENST00000564312 460 ntBASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 AL353708.3-201ENST00000610272 989 ntBASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 AL445675.2-201ENST00000620291 557 ntBASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
AP4E1Q9UPM8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 AL353807.1-201ENST00000427475 662 ntBASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms