Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN1Q9UMX0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN1Q9UMX0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN1Q9UMX0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN1Q9UMX0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 KRT8P11-201ENST00000409686 1436 ntBASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN1Q9UMX0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.68■□□□□ 0.9
UBQLN1Q9UMX0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 AC128688.1-201ENST00000487626 519 ntBASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN1Q9UMX0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 SLC25A1P2-201ENST00000430693 912 ntBASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 TSPY21P-201ENST00000433481 731 ntBASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 AC005363.2-201ENST00000618631 242 ntBASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN1Q9UMX0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms