Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPSNAP3AQ9UFN0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NIPSNAP3AQ9UFN0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NIPSNAP3AQ9UFN0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NIPSNAP3AQ9UFN0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NIPSNAP3AQ9UFN0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.39■□□□□ 0.54
NIPSNAP3AQ9UFN0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 AC006333.2-201ENST00000607957 2099 ntBASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 AL512625.2-201ENST00000417533 625 ntBASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 AC005181.1-201ENST00000604782 1256 ntBASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 ZNF815P-204ENST00000434898 1737 ntBASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 PKD1P1-201ENST00000458669 6805 ntBASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPSNAP3AQ9UFN0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 TFP1-202ENST00000475455 1573 ntBASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPSNAP3AQ9UFN0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 AL390719.1-204ENST00000412397 1219 ntBASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NIPSNAP3AQ9UFN0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms