Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 SLC25A1P2-201ENST00000430693 912 ntBASIC17.66■□□□□ 0.42
LRFN1Q9P244 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 AL049597.2-201ENST00000565575 961 ntBASIC17.66■□□□□ 0.42
LRFN1Q9P244 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN1Q9P244 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN1Q9P244 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN1Q9P244 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 KRT8P41-201ENST00000533985 1514 ntBASIC17.66■□□□□ 0.42
LRFN1Q9P244 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN1Q9P244 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN1Q9P244 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN1Q9P244 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.65■□□□□ 0.42
LRFN1Q9P244 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 AC073508.3-201ENST00000619697 1419 ntBASIC17.65■□□□□ 0.42
LRFN1Q9P244 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 INGX-201ENST00000359239 846 ntBASIC17.65■□□□□ 0.42
LRFN1Q9P244 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN1Q9P244 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN1Q9P244 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.64■□□□□ 0.42
LRFN1Q9P244 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN1Q9P244 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN1Q9P244 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
LRFN1Q9P244 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 AC010203.1-204ENST00000548782 407 ntBASIC17.64■□□□□ 0.41
LRFN1Q9P244 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN1Q9P244 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRFN1Q9P244 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms