Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 AC233702.5-201ENST00000584107 538 ntBASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 RPS2P4-201ENST00000476944 856 ntBASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PARPBPQ9NWS1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 AL445675.2-201ENST00000620291 557 ntBASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 AC131212.4-201ENST00000623606 975 ntBASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PARPBPQ9NWS1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 AFG3L1P-217ENST00000557444 2447 ntBASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PARPBPQ9NWS1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PARPBPQ9NWS1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PARPBPQ9NWS1 KRT16P1-201ENST00000399124 1418 ntBASIC17.21■□□□□ 0.34
PARPBPQ9NWS1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PARPBPQ9NWS1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PARPBPQ9NWS1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PARPBPQ9NWS1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.2■□□□□ 0.34
PARPBPQ9NWS1 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
PARPBPQ9NWS1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms