Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 AL138781.2-201ENST00000617896 1843 ntBASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 AC092368.3-202ENST00000574180 1591 ntBASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LIN7CQ9NUP9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 AC018553.1-201ENST00000616682 1458 ntBASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 AL390719.1-204ENST00000412397 1219 ntBASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms