Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 CICP6-201ENST00000457191 2729 ntBASIC15.16■□□□□ 0.02
SMCO4Q9NRQ5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 AC010141.3-201ENST00000456659 717 ntBASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 THA1P-201ENST00000590384 1145 ntBASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 MIR2861-201ENST00000636310 90 ntBASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.15■□□□□ 0.02
SMCO4Q9NRQ5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 RPS2P35-201ENST00000443417 897 ntBASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 LINC01126-201ENST00000623515 1646 ntBASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.14■□□□□ 0.01
SMCO4Q9NRQ5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 AL512353.2-201ENST00000448759 1962 ntBASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms