Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 AC245052.3-201ENST00000450182 901 ntBASIC17.47■□□□□ 0.39
HMG20AQ9NP66 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 KRT18P14-201ENST00000534205 1250 ntBASIC17.47■□□□□ 0.39
HMG20AQ9NP66 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 AP001160.3-201ENST00000601484 763 ntBASIC17.47■□□□□ 0.39
HMG20AQ9NP66 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 AC009053.2-201ENST00000563701 2365 ntBASIC17.47■□□□□ 0.39
HMG20AQ9NP66 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HMG20AQ9NP66 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.46■□□□□ 0.38
HMG20AQ9NP66 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.46■□□□□ 0.38
HMG20AQ9NP66 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMG20AQ9NP66 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 AL161938.1-201ENST00000569833 2180 ntBASIC17.45■□□□□ 0.38
HMG20AQ9NP66 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 AL031598.1-201ENST00000561511 1773 ntBASIC17.45■□□□□ 0.38
HMG20AQ9NP66 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20AQ9NP66 AC009237.14-201ENST00000609975 1594 ntBASIC17.45■□□□□ 0.38
HMG20AQ9NP66 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 Z98044.1-201ENST00000632503 1764 ntBASIC17.44■□□□□ 0.38
HMG20AQ9NP66 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 KRT18P20-201ENST00000548986 1279 ntBASIC17.44■□□□□ 0.38
HMG20AQ9NP66 SLC7A5P2-201ENST00000553010 536 ntBASIC17.44■□□□□ 0.38
HMG20AQ9NP66 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20AQ9NP66 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms