Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.83□□□□□ -0.03
MS4A6AQ9H2W1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MS4A6AQ9H2W1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 POM121L13P-201ENST00000422362 380 ntBASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.83□□□□□ -0.04
MS4A6AQ9H2W1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 AC026366.1-201ENST00000488803 879 ntBASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 BCL2-203ENST00000589955 5011 ntBASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 AC079598.2-202ENST00000546624 1451 ntBASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 AL158211.5-201ENST00000623583 2518 ntBASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A6AQ9H2W1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 KRT17P3-201ENST00000420566 1262 ntBASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 CD99P1-205ENST00000527459 561 ntBASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 AC008403.3-201ENST00000598924 454 ntBASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 AL121829.2-201ENST00000620908 328 ntBASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A6AQ9H2W1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms