Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFAF3Q9BU61 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 AL355802.2-201ENST00000402069 882 ntBASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 NCF1B-203ENST00000435988 1254 ntBASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 AC104771.1-201ENST00000603335 964 ntBASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFAF3Q9BU61 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
NDUFAF3Q9BU61 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 AC007225.1-201ENST00000566331 1836 ntBASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 AC005181.1-201ENST00000604782 1256 ntBASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 AL121832.2-201ENST00000610979 668 ntBASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 LINC01126-201ENST00000623515 1646 ntBASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFAF3Q9BU61 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 AC061975.6-201ENST00000579045 1553 ntBASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.82□□□□□ -0.04
NDUFAF3Q9BU61 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms