Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGREF1Q99674 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGREF1Q99674 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGREF1Q99674 AC104417.2-201ENST00000562989 1793 ntBASIC18.3■□□□□ 0.52
CGREF1Q99674 Z98044.1-201ENST00000632503 1764 ntBASIC18.3■□□□□ 0.52
CGREF1Q99674 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGREF1Q99674 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGREF1Q99674 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CGREF1Q99674 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.29■□□□□ 0.52
CGREF1Q99674 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CGREF1Q99674 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
CGREF1Q99674 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CGREF1Q99674 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 AL390719.1-204ENST00000412397 1219 ntBASIC18.29■□□□□ 0.52
CGREF1Q99674 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.29■□□□□ 0.52
CGREF1Q99674 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CGREF1Q99674 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.29■□□□□ 0.52
CGREF1Q99674 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CGREF1Q99674 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGREF1Q99674 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.29■□□□□ 0.52
CGREF1Q99674 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.28■□□□□ 0.52
CGREF1Q99674 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CGREF1Q99674 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.28■□□□□ 0.52
CGREF1Q99674 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.28■□□□□ 0.52
CGREF1Q99674 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.28■□□□□ 0.52
CGREF1Q99674 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.28■□□□□ 0.52
CGREF1Q99674 AC090164.3-201ENST00000610780 2143 ntBASIC18.28■□□□□ 0.52
CGREF1Q99674 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGREF1Q99674 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 AC079598.2-202ENST00000546624 1451 ntBASIC18.27■□□□□ 0.52
CGREF1Q99674 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 AC005829.2-201ENST00000571422 1056 ntBASIC18.27■□□□□ 0.52
CGREF1Q99674 AC133552.2-202ENST00000575694 574 ntBASIC18.27■□□□□ 0.52
CGREF1Q99674 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CGREF1Q99674 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGREF1Q99674 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.27■□□□□ 0.51
CGREF1Q99674 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
CGREF1Q99674 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGREF1Q99674 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGREF1Q99674 AC135050.7-201ENST00000624508 2218 ntBASIC18.26■□□□□ 0.51
CGREF1Q99674 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CGREF1Q99674 IRX1P1-201ENST00000438849 1838 ntBASIC18.26■□□□□ 0.51
CGREF1Q99674 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms