Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PRPF18Q99633 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF18Q99633 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.68■□□□□ 0.58
PRPF18Q99633 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRPF18Q99633 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.67■□□□□ 0.58
PRPF18Q99633 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PRPF18Q99633 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PRPF18Q99633 AC018553.1-201ENST00000616682 1458 ntBASIC18.67■□□□□ 0.58
PRPF18Q99633 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF18Q99633 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PRPF18Q99633 CDCA4P2-201ENST00000441182 718 ntBASIC18.67■□□□□ 0.58
PRPF18Q99633 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF18Q99633 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.67■□□□□ 0.58
PRPF18Q99633 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.67■□□□□ 0.58
PRPF18Q99633 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
PRPF18Q99633 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF18Q99633 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF18Q99633 PCDHB18P-201ENST00000524813 2368 ntBASIC18.67■□□□□ 0.58
PRPF18Q99633 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PRPF18Q99633 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF18Q99633 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.66■□□□□ 0.58
PRPF18Q99633 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRPF18Q99633 AC092437.1-201ENST00000624794 1048 ntBASIC18.66■□□□□ 0.58
PRPF18Q99633 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 AC116351.2-201ENST00000606540 1585 ntBASIC18.66■□□□□ 0.58
PRPF18Q99633 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF18Q99633 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF18Q99633 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF18Q99633 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF18Q99633 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF18Q99633 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PRPF18Q99633 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF18Q99633 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF18Q99633 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRPF18Q99633 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.65■□□□□ 0.58
PRPF18Q99633 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.65■□□□□ 0.58
PRPF18Q99633 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.65■□□□□ 0.58
PRPF18Q99633 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.65■□□□□ 0.58
PRPF18Q99633 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
PRPF18Q99633 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.65■□□□□ 0.58
PRPF18Q99633 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF18Q99633 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PRPF18Q99633 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRPF18Q99633 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.64■□□□□ 0.58
PRPF18Q99633 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRPF18Q99633 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms