Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC064862.7-201ENST00000604520 867 ntBASIC18.94■□□□□ 0.62
CFAP54Q96N23 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP54Q96N23 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP54Q96N23 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP54Q96N23 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP54Q96N23 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP54Q96N23 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 AP001005.1-201ENST00000571755 1248 ntBASIC18.93■□□□□ 0.62
CFAP54Q96N23 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP54Q96N23 LINC01465-201ENST00000408887 1940 ntBASIC18.93■□□□□ 0.62
CFAP54Q96N23 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.93■□□□□ 0.62
CFAP54Q96N23 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 DRAXINP1-201ENST00000437611 948 ntBASIC18.92■□□□□ 0.62
CFAP54Q96N23 AC239800.4-201ENST00000603712 296 ntBASIC18.92■□□□□ 0.62
CFAP54Q96N23 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP54Q96N23 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP54Q96N23 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 PCDHAC2-203ENST00000615316 3011 ntBASIC18.91■□□□□ 0.62
CFAP54Q96N23 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.91■□□□□ 0.62
CFAP54Q96N23 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 AC010327.4-202ENST00000591484 748 ntBASIC18.91■□□□□ 0.62
CFAP54Q96N23 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CFAP54Q96N23 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.91■□□□□ 0.62
CFAP54Q96N23 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 AC007375.3-201ENST00000600936 2314 ntBASIC18.9■□□□□ 0.62
CFAP54Q96N23 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 RPL13AP23-201ENST00000480739 586 ntBASIC18.9■□□□□ 0.62
CFAP54Q96N23 AC073648.2-201ENST00000510116 352 ntBASIC18.9■□□□□ 0.62
CFAP54Q96N23 KRT16P6-202ENST00000425692 1426 ntBASIC18.9■□□□□ 0.62
CFAP54Q96N23 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CFAP54Q96N23 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.9■□□□□ 0.62
CFAP54Q96N23 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CFAP54Q96N23 SART3-203ENST00000546611 1184 ntBASIC18.89■□□□□ 0.62
CFAP54Q96N23 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CFAP54Q96N23 AC138894.3-201ENST00000603787 634 ntBASIC18.89■□□□□ 0.62
CFAP54Q96N23 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CFAP54Q96N23 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CFAP54Q96N23 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.89■□□□□ 0.61
CFAP54Q96N23 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms