Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 KRT126P-201ENST00000549467 1181 ntBASIC25.41■■□□□ 1.66
NBPF4Q96M43 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.41■■□□□ 1.66
NBPF4Q96M43 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NBPF4Q96M43 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NBPF4Q96M43 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
NBPF4Q96M43 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 STARP1-201ENST00000397973 869 ntBASIC25.4■■□□□ 1.66
NBPF4Q96M43 SPDYE15P-201ENST00000424157 909 ntBASIC25.4■■□□□ 1.66
NBPF4Q96M43 DUSP5P1-201ENST00000441325 1139 ntBASIC25.4■■□□□ 1.66
NBPF4Q96M43 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
NBPF4Q96M43 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NBPF4Q96M43 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NBPF4Q96M43 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NBPF4Q96M43 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
NBPF4Q96M43 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
NBPF4Q96M43 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NBPF4Q96M43 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NBPF4Q96M43 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
NBPF4Q96M43 AP000523.1-201ENST00000398242 1049 ntBASIC25.39■■□□□ 1.66
NBPF4Q96M43 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NBPF4Q96M43 KRT18P48-201ENST00000434763 852 ntBASIC25.39■■□□□ 1.66
NBPF4Q96M43 SPDYE13P-201ENST00000445314 798 ntBASIC25.39■■□□□ 1.66
NBPF4Q96M43 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.39■■□□□ 1.66
NBPF4Q96M43 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.39■■□□□ 1.66
NBPF4Q96M43 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.39■■□□□ 1.66
NBPF4Q96M43 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.39■■□□□ 1.66
NBPF4Q96M43 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.39■■□□□ 1.66
NBPF4Q96M43 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
NBPF4Q96M43 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NBPF4Q96M43 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.39■■□□□ 1.65
NBPF4Q96M43 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NBPF4Q96M43 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
NBPF4Q96M43 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
NBPF4Q96M43 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NBPF4Q96M43 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NBPF4Q96M43 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
NBPF4Q96M43 TSPY23P-201ENST00000440136 739 ntBASIC25.38■■□□□ 1.65
NBPF4Q96M43 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.38■■□□□ 1.65
NBPF4Q96M43 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.38■■□□□ 1.65
NBPF4Q96M43 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.38■■□□□ 1.65
NBPF4Q96M43 CR769767.2-201ENST00000622735 460 ntBASIC25.38■■□□□ 1.65
NBPF4Q96M43 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
NBPF4Q96M43 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NBPF4Q96M43 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 ZNF815P-204ENST00000434898 1737 ntBASIC25.37■■□□□ 1.65
NBPF4Q96M43 TCF3P1-201ENST00000423021 1937 ntBASIC25.37■■□□□ 1.65
NBPF4Q96M43 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NBPF4Q96M43 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 VENTXP5-201ENST00000523979 775 ntBASIC25.37■■□□□ 1.65
NBPF4Q96M43 ZNF444P1-201ENST00000559497 298 ntBASIC25.37■■□□□ 1.65
NBPF4Q96M43 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NBPF4Q96M43 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NBPF4Q96M43 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.37■■□□□ 1.65
NBPF4Q96M43 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NBPF4Q96M43 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NBPF4Q96M43 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NBPF4Q96M43 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NBPF4Q96M43 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
NBPF4Q96M43 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.36■■□□□ 1.65
NBPF4Q96M43 SDHAP1-207ENST00000440850 2000 ntBASIC25.36■■□□□ 1.65
NBPF4Q96M43 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NBPF4Q96M43 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.36■■□□□ 1.65
NBPF4Q96M43 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.36■■□□□ 1.65
NBPF4Q96M43 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.36■■□□□ 1.65
NBPF4Q96M43 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NBPF4Q96M43 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms