Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 KRT19P1-201ENST00000405746 1186 ntBASIC14.72□□□□□ -0.05
LINC00479Q96M42 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 AL512353.2-201ENST00000448759 1962 ntBASIC14.71□□□□□ -0.05
LINC00479Q96M42 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 NOC2LP2-201ENST00000407594 1944 ntBASIC14.71□□□□□ -0.05
LINC00479Q96M42 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 MCRIP2P1-201ENST00000394346 511 ntBASIC14.71□□□□□ -0.05
LINC00479Q96M42 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 MFSD11-216ENST00000590393 1141 ntBASIC14.71□□□□□ -0.05
LINC00479Q96M42 AC010536.3-201ENST00000620306 533 ntBASIC14.71□□□□□ -0.05
LINC00479Q96M42 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00479Q96M42 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00479Q96M42 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
LINC00479Q96M42 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00479Q96M42 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LINC00479Q96M42 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.71□□□□□ -0.06
LINC00479Q96M42 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.71□□□□□ -0.06
LINC00479Q96M42 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.71□□□□□ -0.06
LINC00479Q96M42 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LINC00479Q96M42 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00479Q96M42 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.7□□□□□ -0.06
LINC00479Q96M42 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 AC093525.10-201ENST00000625130 1569 ntBASIC14.7□□□□□ -0.06
LINC00479Q96M42 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 KRT18P61-201ENST00000585825 1298 ntBASIC14.7□□□□□ -0.06
LINC00479Q96M42 AC105020.6-201ENST00000621523 1217 ntBASIC14.7□□□□□ -0.06
LINC00479Q96M42 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LINC00479Q96M42 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00479Q96M42 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 AC018553.1-201ENST00000616682 1458 ntBASIC14.69□□□□□ -0.06
LINC00479Q96M42 HTR7P1-202ENST00000624664 4411 ntBASIC14.69□□□□□ -0.06
LINC00479Q96M42 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms