Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 LINC01568-207ENST00000641790 1380 ntBASIC20.27■□□□□ 0.84
ATP2A3Q93084 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATP2A3Q93084 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP2A3Q93084 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.27■□□□□ 0.84
ATP2A3Q93084 RN7SL850P-201ENST00000579959 291 ntBASIC20.27■□□□□ 0.84
ATP2A3Q93084 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ATP2A3Q93084 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
ATP2A3Q93084 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2A3Q93084 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 AL390955.1-201ENST00000428694 934 ntBASIC20.26■□□□□ 0.83
ATP2A3Q93084 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 AC092865.7-201ENST00000641832 219 ntBASIC20.26■□□□□ 0.83
ATP2A3Q93084 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A3Q93084 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2A3Q93084 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.25■□□□□ 0.83
ATP2A3Q93084 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.25■□□□□ 0.83
ATP2A3Q93084 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 HCG11-201ENST00000411553 5696 ntBASIC20.25■□□□□ 0.83
ATP2A3Q93084 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A3Q93084 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 KRT18P22-201ENST00000402024 1347 ntBASIC20.25■□□□□ 0.83
ATP2A3Q93084 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2A3Q93084 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP2A3Q93084 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A3Q93084 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms