Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ERCC4Q92889 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 AL390719.1-204ENST00000412397 1219 ntBASIC21.81■■□□□ 1.08
ERCC4Q92889 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.81■■□□□ 1.08
ERCC4Q92889 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.81■■□□□ 1.08
ERCC4Q92889 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC4Q92889 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC4Q92889 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
ERCC4Q92889 FP475955.4-201ENST00000623131 1990 ntBASIC21.81■■□□□ 1.08
ERCC4Q92889 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC4Q92889 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC4Q92889 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC4Q92889 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ERCC4Q92889 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC4Q92889 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC4Q92889 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.8■■□□□ 1.08
ERCC4Q92889 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ERCC4Q92889 RPS2P52-201ENST00000469610 820 ntBASIC21.8■■□□□ 1.08
ERCC4Q92889 AC091874.3-201ENST00000512672 1195 ntBASIC21.8■■□□□ 1.08
ERCC4Q92889 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.8■■□□□ 1.08
ERCC4Q92889 AC098934.4-201ENST00000564127 592 ntBASIC21.8■■□□□ 1.08
ERCC4Q92889 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC4Q92889 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC4Q92889 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ERCC4Q92889 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC4Q92889 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC4Q92889 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.79■■□□□ 1.08
ERCC4Q92889 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ERCC4Q92889 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.79■■□□□ 1.08
ERCC4Q92889 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.79■■□□□ 1.08
ERCC4Q92889 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.79■■□□□ 1.08
ERCC4Q92889 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.79■■□□□ 1.08
ERCC4Q92889 AL121832.2-201ENST00000610979 668 ntBASIC21.79■■□□□ 1.08
ERCC4Q92889 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ERCC4Q92889 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.79■■□□□ 1.08
ERCC4Q92889 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC4Q92889 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.78■■□□□ 1.08
ERCC4Q92889 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC4Q92889 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.78■■□□□ 1.08
ERCC4Q92889 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ERCC4Q92889 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ERCC4Q92889 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC4Q92889 AC006970.2-201ENST00000450065 779 ntBASIC21.78■■□□□ 1.08
ERCC4Q92889 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
ERCC4Q92889 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
ERCC4Q92889 AC009113.1-201ENST00000570267 2443 ntBASIC21.78■■□□□ 1.08
ERCC4Q92889 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
ERCC4Q92889 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC4Q92889 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC4Q92889 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC4Q92889 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.78■■□□□ 1.08
ERCC4Q92889 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ERCC4Q92889 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ERCC4Q92889 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.77■■□□□ 1.08
ERCC4Q92889 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC4Q92889 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC4Q92889 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC4Q92889 AC073210.2-201ENST00000430369 194 ntBASIC21.77■■□□□ 1.08
ERCC4Q92889 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC4Q92889 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.77■■□□□ 1.08
ERCC4Q92889 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms