Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TSPY21P-201ENST00000433481 731 ntBASIC23.74■■□□□ 1.39
RTL9Q8NET4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 AC008622.2-201ENST00000617006 1229 ntBASIC23.74■■□□□ 1.39
RTL9Q8NET4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.73■■□□□ 1.39
RTL9Q8NET4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 AC011558.1-201ENST00000623459 338 ntBASIC23.73■■□□□ 1.39
RTL9Q8NET4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 KRT8P45-201ENST00000414328 1447 ntBASIC23.73■■□□□ 1.39
RTL9Q8NET4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.73■■□□□ 1.39
RTL9Q8NET4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL9Q8NET4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL9Q8NET4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.72■■□□□ 1.39
RTL9Q8NET4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 MIR4674-201ENST00000582457 87 ntBASIC23.71■■□□□ 1.39
RTL9Q8NET4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 AL031432.5-201ENST00000641059 760 ntBASIC23.71■■□□□ 1.39
RTL9Q8NET4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.71■■□□□ 1.39
RTL9Q8NET4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTL9Q8NET4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.7■■□□□ 1.39
RTL9Q8NET4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RTL9Q8NET4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RTL9Q8NET4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
RTL9Q8NET4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTL9Q8NET4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTL9Q8NET4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RTL9Q8NET4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RTL9Q8NET4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTL9Q8NET4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms