Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 AC100791.3-201ENST00000617619 330 ntBASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
DEPDC4Q8N2C3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.88■□□□□ 0.45
DEPDC4Q8N2C3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DEPDC4Q8N2C3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.86■□□□□ 0.45
DEPDC4Q8N2C3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms