Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 MIR718-201ENST00000390190 70 ntBASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 MESTP1-201ENST00000404287 994 ntBASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 TSPY15P-201ENST00000457163 923 ntBASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 AC011506.1-201ENST00000474329 610 ntBASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 KRT8P41-201ENST00000533985 1514 ntBASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC146Q8IYE0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC146Q8IYE0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 AC131212.4-201ENST00000623606 975 ntBASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC146Q8IYE0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 RCC2P6-201ENST00000526625 1557 ntBASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 AC026471.5-201ENST00000615068 467 ntBASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC146Q8IYE0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC146Q8IYE0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CCDC146Q8IYE0 NUDT16P1-203ENST00000513809 620 ntBASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 MIR4497-201ENST00000583208 89 ntBASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 REXO1L10P-201ENST00000615707 1290 ntBASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 REXO1L12P-201ENST00000622156 912 ntBASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 AL031985.4-201ENST00000642138 673 ntBASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC146Q8IYE0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC146Q8IYE0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms